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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|225853
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWQLLLTV ALAGSSDAFS GSEATPATLG RASESVQRVM PGLGTNSSGK PKFTKCRSPE  60
   61 LETFSCHWTD GVHHGLKSPG SVQLFYTRRN TQEWTQEWKE CPDYVSAGEN SCYFNSSYTS 120
  121 IWIPYCIKLT NNGGMVDQKC FSVEEIVQPD PPIGLNWTLL NVSLTGIHAD IQVRWEPPPN 180
  181 ADVQKGWIVL EYELQYKEVN ETQWKMMDPV LSTSVPVYSL RLDKEYEVRV RSRQRSSEKY 240
  241 GEFSEVLYVT LPQMSPFTCE EDFRFPWFLI IIFGIFGLTV MLFVFIFSKQ QRIKMLILPP 300
  301 VPVPKIKGID PDLLKEGKLE EVNTILAIQD SYKPEFYNDD SWVEFIELDI DDPDEKTEGS 360
  361 DTDRLLSNSH QKSLSVLAAK DDDSGRTSCY EPDILENDFN ASDGCDGNSE VAQPQRLKGE 420
  421 ADLLCLDQKN QNNSPYHDVS PAAQQPEVYL AEEDKPRPLL TGEIESTLQA APSQLSNPNS 480
  481 LANIDFYAQV SDITPAGSVV LSPGQKNKAG NSQCDAHPEV VSLCQTNFIM DNAYFCEADA 540
  541 KKCIAVAPHV DVESRVEPSF NQEDIYITTE SLTTTAERSG TAEDAPGSEM PVPDYTSIHL 600
  601 VQSPQGLVLN AATLPLPDKE FLSSCGYVST DQLNKILP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle