YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169783242
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNRLGESY GEDDHSHSPM MNPHQTNNRS PSPGRPLNAY QLSDVSYGPQ ERLHMPSSDL  60
   61 LAEQPTYSVE RLPNSYGHNE AYEQHHQQSY PGYEYAVDPE AHHDAYYTQP YQPTVTPHDD 120
  121 YDLGQYPEHQ HQHSYSDDRI PMLQQDNPFG PDPYSDEYQV EEQADGHTPS PAPIRRWKTV 180
  181 KEVQLFNGNL VLDCPIAPKL LNQVPHAEPP GRDEFTHMRY SAATCDPNDF FEERFTLRQK 240
  241 LFAKPRHTEL FIVVTMYNED DFLFARTLIG VFKNIEHMCS RTHSKTWGKD AWKKIVVCVI 300
  301 SDGRAKINPR TRAVLAALGV YQDGIAKQQV NGKDVTAHIY EYTTQIALEL KGTQVQIKGR 360
  361 SAVPVQMIFC LKEKNQKKIN SHRWFFQAFG RVLDPNICVL LDAGTKPGKD SIYRLWKAFD 420
  421 VEPMCGGACG EIKVMLSHGK KLLNPLVAGQ NFEYKLSNIL DKPMESAFGF ISVLPGAFSA 480
  481 YRFVALQNDK NGQGPLERYF LGEKMHGANA GIFTANMYLA EDRILCFEIV TKRNCRWLLQ 540
  541 YVKSSTGETD VPDQMAEFIL QRRRWLNGSF FAAVYAIAHF YQIWRSDHSA IRKFALLIEF 600
  601 FYQTINMLFA WFGIGNFFLV FHILTTYLGQ KDLLGTTGKV LGVVFEWLYL ATLVTCFVLA 660
  661 LGNRPGGSNK FYMTMVYFWI GIMIYLAFAC IFVTVKSIQT EVQQDGFTFT DLFTNSTFFT 720
  721 IIVSLGSTYV MWFVASIIFL DPWHMFTSFI QYILLTPTYI NVLNIYAFCN THDITWGTKG 780
  781 DDKAEKLPSA NLKPGGKVDV DIPQDDGDLN AQYDTELAKF AEKPPKEVQV ISEEERQADY 840
  841 YKGFRSAVVL AWVFCNFALG AVVLSAAGLD RFDQSEKTSE DSNKRSTIYM AVVLWSVAGL 900
  901 SIFKFIGALW YLVVRMFRGV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle