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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8886041
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSCWDTAVL PCALLGCLLL TGYCSGSKLK GPELSLKGTQ HVMQAGQTLF LKCRGEAAHS  60
   61 WSLPTTVSQE DKKLSVTRSA CGRNNRQFCS TLTLNMAQAN HTGLYSCRYL PKSTSKEKKM 120
  121 ESAIYIFVSD AGSPFIEMHS DIPKLVHMTE GRELIIPCRV TSPNITVTLK KFPFDALTPD 180
  181 GQRIAWDSRR GFIIANATYK EIGLLTCEAT VNGHLYQTSY LTHRQTNTIL DVQISPPSPV 240
  241 RFLRGQTLVL NCTVTTDLNT RVQMSWNYPG KATKRASIRQ RIDQSNPHSN VFHSVLKINN 300
  301 VESRDKGLYT CRVKSGSSFR TFNTSVHVYE KGFISVKHRK QQVQETIAGK RSHRLSMKVK 360
  361 AFPSPEVVWL KDGVPATEKS ARYSVHGYSL IIKDVTAEDA GDYTILLGIK QSKLFRNLTA 420
  421 TLIVNVKPQI YEKSVSSLPS PPLYPLGSRQ VLTCTVYGIP QPTIKWLWHP CHYNHSKERN 480
  481 DFCFGSEESF ILDSSSNIGN RIEGITQRMM VIEGTNKTVS TLVVADSRTP GSYSCKAFNK 540
  541 IGTVERDIRF YVTDVPNGFH VSLEKIPTEG EDLKLSCVVS KFLYRDITWI LLRTVNNRTM 600
  601 HHSISKQKMA TTQDYSITLN LVIKNVSLED SGTYACRARN IYTGEEILRK TEVLVRGEHC 660
  661 SKKAIFSRIS EFKSRRSGCA TQSNVKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle