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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8886326
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGPAWWAVL VLLAMADAVA GRFVVEKNSV QVTSPESLKG KYECAIGNFG LPQYGGTLQG  60
   61 WVVYPKDNRQ ACKEFDVSFK GHKSGARPNF VLIDRGECFF TTKAWNAQLA GAAAILVVDS 120
  121 KDEPLITMDN PEDTGTKHLE NITIPSVLIT KKLGEDLKKS AENGDMVSVL LDWRESLPHP 180
  181 DERVEYEFWT NSNDECGPKC DMQMDFVKSF RGTAQVLEQK GYTQFTPHYI TWYCPEAFTV 240
  241 SKQCKSQCIN HGRYCAPDPE QDFSKGYDGK DVVVQNLHQV CVFKVANDTG KPWLWWDYVH 300
  301 DFAIRCPMKE KKYTHECASH VIKSLGLDMD KINKCVGDPE ADEENPILKA EQDAQIGHGK 360
  361 RGDVTILPTL VVNNRQYRGK LDKGAVLKAI CSGFEETTEP AICLSEDVQT NECLENHGGC 420
  421 WVDKANNVTA CKDTFRGRVC ECPIVKGVKF VGDGYTNCEA SGVGRCEINN GGCWKETKNG 480
  481 KTISACSHEE SEGCKCPQGF KGDGVKSCED IDECKAKSAC QCNGCSCENT WGSYECSCGG 540
  541 NNMLYMREQD TCISKQAASS VGWSFMWVIF FGLVFAGVGA YAVYKYRLRS YMDSEIRAIM 600
  601 AQYMPLDSQE GANQQQHVAH AGDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle