YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2262099
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIITVLHSHV SFYFIILSFL FFHAKALHLV GSDGATITIV NRCSFTVWPG ILSNSGSGDI  60
   61 GTTGFELVPG GSRSFQAPAS WSGRFWARTG CNFNSDTGQG TCLTGDCGSN QVECNGAGAK 120
  121 PPATLAEFTI GSGPADPARK QDFYDVSLVD GYNVPMLVEA SGGSEGTCLT TGCVTDLNQK 180
  181 CPTELRFGSG SACKSACEAF GSPEYCCSGA YASPTECKPS MYSEIFKSAC PRSYSYAFDD 240
  241 ATSTFTCTDA DYTITFCPSL PR

Type	Start	End	Confidence
Signal Peptide	1	26	0.50
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	262	0.84