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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51491872, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHGLAARL LPLLLLAMLA VAHASIFLSN QRLKPRFQRD RRNIRPNIIL ILTDDQDIEL  60
   61 GSMQVMNKTR RIMEQGGTHF SNAFVTTPMC CPSRSSMLTG KYAHNHNTYT NNENCSSPSW 120
  121 QAQHEPRTFG VYLNNTGYRT AFFGKYLNEY NGTYIPPGWR EWVAMVKNSR FYNYTLCRNG 180
  181 VREKHGFEYP KDYLTDLITN DSINYFRMSK KIYPHRPVLM VISHAAPHGP EDAAPQYTTA 240
  241 FPNASQHITP SYNYAPNPDK HWIMRYTGPM KPIHMEFTNM LQRKRLQTLL SVDDSVEKVY 300
  301 NMLVDTGELD NTYVIYTADH GYHIGQFGLV KGKSMPYEFD IRVPFYIRGP NVEAGGINPH 360
  361 IVLNIDLAPT ILDIAGMDVP PDMDGKSILK LLDTDRMMNR FQLNKKGKVW RDSFLVERGK 420
  421 LLHKVLNDGK DMAEEENYLP KYQRVKDLCQ RAEYQTPCEQ IGQKWQCVED ATGKLRLSKC 480
  481 KGMSSLSAVQ KPSVSSIKSQ LYLQSISTPD VSLNSEPQEC NCQPKSYRLS TYSKSKLFSK 540
  541 KKMKSLKSFS RNRFARALSM ETGGDLYAVD LDNEHRNLSL RHSTADEDEE FSGAEPTTIS 600
  601 QSNSLSVPSS IKVTHRCSIL ANETVKCDVG LYKSLQAWKD HKLHIDHEIE TLQTKIKNLR 660
  661 EVRGHLKKAR PEECDCNKYY YKSKYKSKLR KYKTGNVHPF RKGQEKDKKA WMMLEQKRRK 720
  721 KLRKLLKRLR NNDTCSMPGL TCFTHDNQHW QTAPFWTLGP FCACTSANNN TYWCMRTINE 780
  781 THNFLFCEFA TGFLEYFDIN TDPYQLVNAV NTLDRYVLNQ LHVQLMELRG CKGHKQCNPR 840
  841 TRSLDMGGKE RSSYDEYRQF QRRKWPKVRK PVSKSLGQIW EGWEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle