YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50540112, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLDFLDDV RRMNKRQLYY QVLNFGMIVS SALMIWKGLM VVTGSESPIV VVLSGSMEPA  60
   61 LHRGDLLFLT NRVEDPIRVG EIVVFRIEGR EIPIVHRVLK IHEKENGDIK FLTKGDNNSV 120
  121 DDRGLYKQGQ HWLEKKDVVG RARGFVPYIG IVTILMNDYP KFKYAVLCLL GLFVLVHRE

Type	Start	End	Confidence
Cytoplasmic	1	19	0.89
Transmembrane Helix	20	40	0.90
Non-Cytoplasmic	41	179	0.86