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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49900366, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTHSLLCL FVAVSSALAE EDTVVNPRGA RPIEHGFKAQ DTCQTKEWPG CTDDDWGSKC  60
   61 PSGCRVQGLM DKADHDLLKK IEKIRRLLVE GQKLYRSADE VSKTTYTYLR EKLTSNSGYD 120
  121 NRYMSLAEQL RQRITDIKIK IDRQLRLLDA LKSQVKDQVV VMQRLEVDID IKLRTCKGSC 180
  181 ASYSEFSVDR ESYVTLDKQM DNLNAMRVQS VETVSSLGIM KSRPLKDVLV PTIYKSGTGK 240
  241 AEQKLLFGDV GQMQLSLEAE GSTAESAATV SKFPTSGTGS TSQTSNKQCT KSVRKVITHT 300
  301 KDGPVEKVEV SSSGPGCDDL GKLGISDSEF LTAAKDGKDL SRDGLKITVT GGDEKSLTSL 360
  361 SHSTSDLGGF GGDFFKNLGT DNRKYASSSS STSTKTVSDG SKSYSKTTLT SDPIFGDDLG 420
  421 AFMRGDVEED MPDIHARSVK SQDDRKAGFV GGDCVEIQQK HVNGGQSGMF KIKPAGSEEV 480
  481 VEVYCDQSTG LGGWTLVQQR EDGSVNFNRT WKEYLNGFGQ IDKQGKGEIW IGNKFLHLLT 540
  541 QKESLLRVEL QDWTGAEAYA EYNIKVGSEA EGFPLTASDY DGDAGDALVR GHPNLGSFLS 600
  601 HAGMKFSTFD RDNDKWEENC AEMYGGGWWY NNCQSANLNG IYYKGGQYDP ATKVPYEIEN 660
  661 GVVWLPFKPA DYSLKVVRMK IRPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle