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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HTR1A_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILVTLFCIC ALVTSLQADA RLSKRYVIGG CPSHCDKSMC PTMPKDCSTG QVMDHCNCCL  60
   61 VCASGEGEAC GGVGKLGDPV CGESLECSVT GGVSYSATVR RRGKQGVCVC KSSDPVCGSD 120
  121 GVSYRDICEL KRVSNRAQSL QQPPVLFIQR GACGTSLHDN PNSLRYKYNF IADVVEKIAP 180
  181 AVVHIELYRK MVYSKREMAV ASGSGFVVSD DGLIVTNAHV VANKNRVKVE LKNGASYDAK 240
  241 IKDVDEKADI ALIKIDLPNK LPVLLLGRSA DLRPGEFVVA IGSPFSLQNT VTTGIVSTTQ 300
  301 RGGKELGLRN SDMDYIQTDA IINYGNSGGP LVNLDGEVIG INTLKVTAGI SFAIPSDKIR 360
  361 QFLAESYDRL ARGRGTTKKR YIGVRMMTLT PSLSKELKGR LRDFPDITSG AYVIEVISKT 420
  421 PAAAGGLKEH DVIISINGQR ISTATDVSAI IKKESSLRVV VRRGNEDIIL TIIPMEIDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle