YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63100712, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTQEQCPHR NNVQSTEKPQ VYKVGIYGWR KRCLYFFVLL LMILIVVNLA LTIWILKVMN  60
   61 FTIDGMGHLR ITERGLKLEG DSEFLQPLYA KEIQSRPGSP LFLQSSKNVS VNILNEKKQL 120
  121 VSQLVAGSHG VHARGKMLEV KSSSGKLLFS ADDHEVVVGA ERLRVMGAEG AVFSNSVETP 180
  181 HVRAEPFKEL RLESPTRSLY MEAPKGVKIE ADAGDFQATC RSDLRLESKD GEISLDASKI 240
  241 KLPRLPEGKA STSGPRQTVF EVCVCPNGKL FLSQAGTGST CQMSSNLCL

Type	Start	End	Confidence
Cytoplasmic	1	32	0.94
Transmembrane Helix	33	56	0.92
Non-Cytoplasmic	57	289	0.94