YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182889982, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSFMGGGLF CAGVGNILLV ISTATDYWMQ YRQSSSYMHQ GLWRYCVPGK CMTHTDSIAY  60
   61 WDATRAFMIL ATLACFFGMI IGVMAFINYS SFTGFDRTFA AGILYFISCF FVLLAMAVYT 120
  121 GMTVNYYGKR YGNWRFSWSY IMGWVSVVLT FFSGIFYMCA YRMHEPRGPM SR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	29	0.90
Non-Cytoplasmic	30	66	0.88
Transmembrane Helix	67	89	0.93
Cytoplasmic	90	98	0.81
Transmembrane Helix	99	121	0.90
Non-Cytoplasmic	122	139	0.84
Transmembrane Helix	140	161	0.94
Cytoplasmic	162	172	0.90