YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49902775, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTCLQFTG FVMSFLGWIG LIVATATNEW VFTCKYQMNT CRKMDELEAK GLWADCVIST  60
   61 ALYHCITLTQ ILELPAYIQT SRALMVTASI LGLPAVVMVL MSMSCINLGG EPESAKNKRS 120
  121 VLGGILILLT AFCGIVSTVW FPIGAHHEKG LMSFGFSLYS GWVGTALCLL GGCIISCCSV 180
  181 DSPATYTENN RFYYSKQGPA HTGPTSTNHA KSAHV

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.76
Transmembrane Helix	8	32	0.81
Cytoplasmic	33	50	0.76
Transmembrane Helix	51	72	0.74
Non-Cytoplasmic	73	83	0.83
Transmembrane Helix	84	108	0.84
Cytoplasmic	109	120	0.90
Transmembrane Helix	121	143	0.93
Non-Cytoplasmic	144	157	0.85
Transmembrane Helix	158	180	0.86
Cytoplasmic	181	215	0.95