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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33327152, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSLTLLCT SFLGLCFGSS FPSNINIGGL FPTESHEYEV FRFALSHHQD IPKLVPQVDM  60
   61 VKLGNSFSMT YAFCSQFSKG VYAIIGVYDR KTVNMLMSFC GALHVCFVTP SFPMENSNQF 120
  121 VIQLRPELQD ALVGVIEHYR WSKFVYMYSS DSGLSVLQKV LDTAAEHNWL VTSVNVETMT 180
  181 EASFLKVFQD LDKKKEGQII IDCELERLTS ILKKIIELGK NVKSYHYILA NLGFLDIDLT 240
  241 EFKKGEANVT GFQLVNYADP NVSRTVQQWM EFDNKDAKVP KRRLKYTGAL TYDGVKVMST 300
  301 AFQNLRRQRI DISRRGNAGE CLANPPAPWG QGIDIQRALQ QVRIEGLTGH IQFNEKGRRT 360
  361 NYSISVMELR PTGPKKVGYW NEDEKFVSTA AYMPGSNETY GLQNRTYIVT TILESPYVML 420
  421 KKNHEHFTGN DKYEGYCVEL AAEIAKHVGY HYILKIVADG KYGARDAETM MWNGMVGELV 480
  481 YGKADVAVAP LTITLVREEV IDFSKPFMSL GISIMIKKPT KSKPGVFSFL DPLAYEIWMC 540
  541 IVFAYIGVSV VLFLVSRFSP YEWHADDCED GAEENPNQPS SSSAQPGQNQ QNQNQQSQEQ 600
  601 TNEFGIFNSL WFSLGAFMQQ GCDISPRSLS GRIVGGVWWF FTLIIISSYT ANLAAFLTVE 660
  661 RMVSPIESAE DLAKQTEIAY GTLDAGSTKE FFRRSKIAVF EKMWSYMKSA DPSVFVKTTD 720
  721 EGVMRVRKSK GKYAYLLEST MNEYIEQRKP CDTMKVGGNL DSKGYGIATP KGSPLRNPVN 780
  781 LAVLKLNEQG LLDKLKNKWW YDKGECGSGG GDSKDKTSAL SLSNVAGVFY ILIGGLGLAM 840
  841 LVALVEFCYK SRTESRRMKQ SINDAMHCST LTRMSGNGSG GENGRIVTHD FPKAVQTLPC 900
  901 MSHAASMGLG ASGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle