YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45387597, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQKVVLITG CSSGIGLSLA VHLASNPAKA YKVYATMRNL DKKQRLLESV RGLHKDTLDI  60
   61 LQMDVTDQQS ILDAQRNVSE GRIDILVCNA GVGLMGPLET HSLDTIRAIM DVNLLGTIRT 120
  121 IQTFLPDMKK KRHGRILVTG SMGGLQGLPF NEVYCASKFA IEGACESLAI LLQHFNIHIS 180
  181 LIECGPVNTD FLMNLKRTET GDKELEVEVD AHTRSLYDQY LQHCQSVFQN AAQDTEDIIQ 240
  241 VYLEAMEAQT PFLRYYTNRA LLPMSSLKLT SMDGSQYIRA MSKLIFSSPG TDAQK

Type	Start	End	Confidence
Signal Peptide	1	23	0.89
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	295	0.98