YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32187087, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLASLSLW RIIILILPLV SLGQTFEYGW PDNYDKPPQC VDIPVDLRLC QGVGYHQMLL  60
   61 PNLLEHESMA EVKQQAGSWV PLLHKNCDPG TQLLLCSLFA PVCMERPIYP CRRLCENVRD 120
  121 GCSPIMAAFG FPWPHILTCD KFPQDDMCIN TPNDTSTSEP NGHPPVCPPC DNEMKMDVIL 180
  181 DHMCASEFAI KTKIQEVKRE NMDRKVTLQK KKRTIKMGTL KKKDLKKLTL YLKNGADCPC 240
  241 TQLDNTRNTY LIMGRKVDKQ YLLTGIHKWD KSNREFKKTM KKLKSHKCPA YENVFK

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	296	0.99