YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46309543, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEENIFLFV PNLIGYARIV LALVSFFLMP CCPGPAVFCY LLSALLDAFD GHAARALNQG  60
   61 TKFGAMLDML TDRCATMCLL VNLALLYPSY TFLFQLSMCL DVASHWLHLH SSMMKGATSH 120
  121 KAIDLSGNPI LRLYYTSRPV LFFMCMGNEL FFCLLYIMFY IEEPQVWLQW LLGVCGVVCL 180
  181 LKSGISFLHL ITASRNMAAI DVADREKERS KAQ

Type	Start	End	Confidence
Cytoplasmic	1	18	0.73
Transmembrane Helix	19	42	0.87
Non-Cytoplasmic	43	85	0.71
Transmembrane Helix	86	109	0.68
Cytoplasmic	110	139	0.89
Transmembrane Helix	140	160	0.96
Non-Cytoplasmic	161	166	0.84
Transmembrane Helix	167	190	0.89
Cytoplasmic	191	213	0.92