YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14970738
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLCALCLT ALLAAFARLA ESVSPVVRCE PCDDGAMVLC KPLPWDCDEP VKEPGCGCCL  60
   61 TCPLTEGQAC GVYTGRCGTG LSCQHRPGES KPLQALLEGR GVCAKAPDKK QSGSPSHGHD 120
  121 NPETEGKEQN GTRTAGTGEA ETVHHTTDIS RDVQGGSRTP SEPSDPMMHS NKLEMIQKEQ 180
  181 VKKSQVHKVV PFSGWIVQDI HNFSLESKRE NEYGPCRREM ESVMKQLKFT NVLNPRRFRI 240
  241 PNCDQKGFYK KKQCSPSKGR KRGHCWCVDK YGQPLPGYDG KEKVHCYNME TK

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	292	0.99