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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41080617, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYWCLLCVTL TGLSVARALT DRPCGGKITI TSAGYVTSPD YPTGYPVNKQ CTWLIQAPDP  60
   61 QQKILINFNP HFDLESRECK YDFVQVFDGA DENALSLGRF CGKIAPSPII SSGNSLLIKF 120
  121 TSDYESAGAG FSIRYEIHRT GTECSRNFTE PHGLIETPGF PDKYPNNLEC IFIIFAPKMA 180
  181 EIILDFQSFD MEPDTTAPAG AVCRFDYLEI WDGYPTVGPH IGRYCGSRHP GRVISYTGIL 240
  241 SLSIHTDNAI TKEGFSANYS IRSSSDQLQP HQDECMYPLG MESGEITEDR IAASSQYNPS 300
  301 WSRLRSRLNY LENGWTPSED SSREWIQVDL GFLRYVTAIG TQGAISKETK KAYFVRTYRI 360
  361 SVSSNGEDWI TLKDKTKQMV FQGNDNPTDE VRALLPKPTL TRYIRIRPLL WEQGICMRFE 420
  421 VYGCKIPDAP CSNMLGMVSG QISDSQISVW PSAERGWLPE QARLLTGRTG WVVAHPQGLV 480
  481 KNQSLELDLG AQRMVTGLVL QGGKYRDLNI FIKRFRVTYS VNGTDWNHIL EENSNKVKVF 540
  541 IGNQNHDTPE VRTFDPVLMR FLRIYPERGS PDGMGLRLEV LGCDLQEPTT PLPLATTMET 600
  601 TAATVTSASM LLGNIPTTTT FPTTAENCDD DDGNCHSDAL TDYDTTETAV SEPFLEMEEA 660
  661 PAYLWFACDF GWIDHPSYCG WSQDGGEGAE WHINNNSKHA DHKLPSLDHT GMPNNFIYAA 720
  721 ANTNTQTEME RTDEMETDEE LERKGGRVAR LASSQVTAPD SDLCMSFWYH FTEKHAGTLN 780
  781 IKQKVEHEQV DEEREILIRL LNGQTKSRWR EGRVLLPSAD TPYQVIIEAQ VNPTHSGYIS 840
  841 LDDIKILEVN PEDCKDPENT EDDEDEVEEI VNCEGTDNTX WSFGRGSMLK SLDPILITII 900
  901 VMSAVGVLLG AVCGVLFYCA CAHTTNRNLS ALENYNFELV DGVKLKKEKL SAQKSYTEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle