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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46309459, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKTVLLTAS LLCFIFQECC GRNEEERLIN YLFKERGYNK ELRPVQNKDE TVDIYLALTL  60
   61 SNLISLKEVD ETLLTNVWME HGWKDHRLTW NESEYDIPVL RLPPSMVWLP EIVLENNNDA 120
  121 QFQVAYYCNV LIYSSGDMYW LPPAIFRSSC SINVNYFPFD WQNCSLKFSS LTYNAKEISL 180
  181 NLKMEQENTT YYKVEWIIID PEGFTENGEW EIVHKPARRN IYKSIPKESN KHQDITFYLI 240
  241 IKRKPLFYIV NIIIPCVLIS FLASLVYYLP ADSGEKMTLS ISVLLAQSVF LLLISQRLPE 300
  301 TSMAVPLIVK YLMFIMVLVT VVVLNCVIVL NLHFRTPSTH VMTEWTKEFF LERLPRLLHM 360
  361 SLPVEDQPVP ESALPRRSSS LGYIAQAEEY YSVKSRSELM FEKQSERHGL AARPTPKATY 420
  421 TSSNDSEVSE QLYNEMKPAV EGANYIVKHM HDKNDYNEEK DNWSGIARTV DRLCFYVVTP 480
  481 VMMIGTICIF LMANYNQPPA LPFQGDPFSY TEENRRYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle