YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29786239, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLVLGTFL TVLSVSGGSF VPCEPCDQKA LSMCPPVPVG CQLVKEPGCG CCFTCALAEG  60
   61 QACGVYTGTC THGLRCLPRN GEEKPLHALL HGRGVCTNEK GYKPPHPPID RESIEHDDTV 120
  121 KPDTTEDQIP KIPLYPKPDV INSKKQAALF KDKKKQQEKL RSVGSLDYSP LPIDKHEPEF 180
  181 GPCRRKLDGI IQSMKDTSRV MALSLYLPNC DRKGFFKRKQ CKPSRGRKRG ICWCVDKYGV 240
  241 QLPGTDYSGG NIQCKDLENS NNNNE

Type	Start	End	Confidence
Signal Peptide	1	23	0.88
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	265	0.99