YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPX8_DANRE
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGGYPSK SSASRAGLFK VLLSVALCMG SLYLLQNKLS KSRKTKDFYS YEVKDARGRT  60
   61 VSLEKYRGKV SLVVNVASGS ELTEQSYRAL QELHRELGTS HFNVLAFPCS QYGDTESGTS 120
  121 REIEAFAKSN YGVTFPIFNK IKIMGSEAEP AFRFLTDSVQ KIPRWNFWKF LVSPEGQVVR 180
  181 FWKPEEPVSD IRKEATTLVR NIILKKRQEL

Type	Start	End	Confidence
Cytoplasmic	1	15	0.60
Transmembrane Helix	16	35	0.86
Non-Cytoplasmic	36	210	0.71