YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37589073, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGHAILYTG VTLAFWSTMV IVGICYTIFD LGFRFDVAWF LTETSPFMWA NLGIGLAISL  60
   61 SVVGAAWGIY ITGSSIIGGG VKAPRIKTKN LVSIIFCEAV AIYGIIMAIV ISNLAENFSG 120
  121 TTPETIGSKN YQAGYSMFGA GLTVGFSNLF CGICVGIVGS GAALADAQNA NLFVRILIVE 180
  181 IFGSAIGLFG VIVAILQTSK VKMGN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.93
Transmembrane Helix	7	29	0.89
Non-Cytoplasmic	30	48	0.86
Transmembrane Helix	49	71	0.91
Cytoplasmic	72	90	0.85
Transmembrane Helix	91	112	0.94
Non-Cytoplasmic	113	139	0.90
Transmembrane Helix	140	164	0.86
Cytoplasmic	165	172	0.86
Transmembrane Helix	173	196	0.90
Non-Cytoplasmic	197	205	0.90