YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32451644, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPIIEAVAL FLGFVSWTMV GITIPNRYWK VSSLDGTVIT TSTLYENLWM SCATDSTGVH  60
   61 QCREFPSLLA LSGYIQASRA LMIAAVVSGT FGVVATLIGM QCSKAGGENY VLKGRIAGTG 120
  121 GVFFLLQGLC TMISVSWYAA NITQEFFNPL YPGQKYEIGE ALYIGWASAV LAICGGVCLM 180
  181 FSCKLGTEKK TAYSYHPTRE TVYSASASRR ETQSTYGKNA YV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	26	0.91
Non-Cytoplasmic	27	79	0.91
Transmembrane Helix	80	100	0.94
Cytoplasmic	101	118	0.86
Transmembrane Helix	119	140	0.93
Non-Cytoplasmic	141	161	0.93
Transmembrane Helix	162	183	0.93
Cytoplasmic	184	222	0.98