YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41053833, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLGDGLVL FSTVFVVVLV GTRSAVWPTV LAASLYLFLV MFRFPQVPSS RTRQVLQPGS  60
   61 RVPAGGVSAV AHRGGGHDAP ENTIAAIRAA SENGATGVEL DLEFTADGVP ILMHDETVDR 120
  121 TTNGSGPLNK LLFSELRKLD AAAKHRFSDR FRGEKVPTLQ EAVEECIKHQ LTIYFDVKGH 180
  181 PDEAAAALKE LFRKYPVLYN TSIVCSFEPK VIYRMRQADP NVVTALTHRP WSLSRFGDGT 240
  241 PRFSSTWKQH WMQVLDVLLD WAHHHLLWNL CGVSAFLVQK NFISPDYVQY WAARGVEVVG 300
  301 WTVNTAVEKQ YYQQLLKINY ITDSLVEDCD PHY

Type	Start	End	Confidence
Signal Peptide	1	24	0.67
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	333	0.89