YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	INSI1_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLEEHCWS CSCSTSVKTK DLSSAGWIVC KTGEMMSIIT SVLSHAYGSL HSLQSANLIR  60
   61 RGLVLFIVGV VLALVLNLLQ IQRNVTLFPE EVLDTLFSSA WWIPLCCGTA AAVVGLLYPC 120
  121 LDHHLGEPHK FKREWASVMR CIAVFVGINH ASAKLDFANN VQLSLTLAAL SLGLWWTFDR 180
  181 SRSGFGLGLT TALLATLIAQ LLVYNGIYQY TSPDFLYVRS WLPCIFFSGG VTVGNIGRQL 240
  241 AMGSTEKIHN D

Type	Start	End	Confidence
Cytoplasmic	1	61	0.84
Transmembrane Helix	62	81	0.94
Non-Cytoplasmic	82	99	0.90
Transmembrane Helix	100	121	0.94
Cytoplasmic	122	135	0.88
Transmembrane Helix	136	153	0.91
Non-Cytoplasmic	154	160	0.73
Transmembrane Helix	161	178	0.93
Cytoplasmic	179	184	0.88
Transmembrane Helix	185	207	0.89
Non-Cytoplasmic	208	216	0.84
Transmembrane Helix	217	237	0.90
Cytoplasmic	238	251	0.88