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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134054378, gi...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLWIVFFI FDIIFITDCA RGPPRVAEKI AHRQTVRIGR TMKLQCPVEG DPPPLIMWTK  60
   61 DGRNIHSGWM RFRVLQQALR IKEVEADDAG TFICKATNGF GSVNINYTLI VIDDSSAGRE 120
  121 GARPAGETEY STDLTGKLVR PRFTQPAKMR KRVIARPVGS SVRLKCTASG NPRPDIVWLK 180
  181 DSRPLTPEEV GEGRKKKWTL SLKNLTPEHS GKYTCHVSNR AGEINATYKV EVIQRTNSKP 240
  241 ILTGTHPVNT TVDYGGTTSF QCKVRSDVKP VIQWLKRVEP GGEGKYNSTI EVGDHHFVVL 300
  301 PTGDVWSRPD GSYLNKLLIT RAKEEDAGMY ICLGANTMGY SFRSAFLTVL PDPKPPFSPI 360
  361 PSVLPPSLPW PVIIGIPAGI VFILGTVLLW FCQSRKHCSS GAIISAQTLP NGHRQPPRDR 420
  421 PADKDCIASV AYEEYLAQQQ QQQLLLAQSA PKVYPKIYSD IHTHTHSHVD GKIHQHQHIH 480
  481 YQC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle