YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182891244, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSPPGQWS CGCPLKLLVL FFFFFTCAFS SKNNIILILT DDQDEQMGGM TPMKKTRELI  60
   61 GDAGATFSNA FTSTPLCCPS RSSFLSGRYP HNHLVHNNSV EGNCSSAAWQ KTAEPFAFPV 120
  121 YLNKMRYQTF YCGKYLNQYG SKDAGGVAHV PPGWDQWHAL VGNSKYYNYT LSVNGKEEKH 180
  181 GDSYEKDYLT DLVLNRSLHF LEERSPSHPF FMMLCPPAPH SPWTAAPQYS GSFSGVKAPR 240
  241 NGSFNKPGTD KHWLLRQPAN PMPNSSIDYL DNAFRRRWQT LLSVDDLVER LLKKLDSVKE 300
  301 LDNTYIFYTS DHGYHTGQFS LPIDKRQLYE FDIRIPLLVR GPGIKAK

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	347	0.99