YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41054812, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVMKQSSC YFSKRTMILL LSLALMSLAF LKLPSFHTEL KPVEVPVDNK FRKRVHSHVR  60
   61 EILDKECRPS FARQRMVTEH HGSTPTIDPF LNKNMKLDEQ IFQYPPPFGF LDMKKKLEEI 120
  121 LNLLPVSSEQ RLGERDCRRC VVVGNGGILK GLGLGHLLNR FDIIIRLNSG PLQDFSADVG 180
  181 NRTTIRMSYP ESCPKVWEDT DPDLKYVAVI FKSVDFHWLR AMISRTPVSL WDRLFFWQNV 240
  241 PMSVPVKTSQ FHLLNPQIIR EMALDLLNYP EPKKRLWSWD QNIPTLGLTA LNLATYICDE 300
  301 VSLAGFGYNL SQKEAPLHYY DSVPMTTILK EAMHNVQKET VFLKRLVASG SITDLTGGIH 360
  361 CSFC

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	364	0.99