YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41055927, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALILINNTG NKHNNYIRQA KYVNNPHLDG MEEDILYHFS LSTKTHDLPQ MFGDVKFVCV  60
   61 GGSPNRMRTF AEYIHEQLEM PSNTADIKDI CEGTDRYSMY KVGPVLSISH GVGVPSISIM 120
  121 LHELIKLLYH ARCRGVIIFR IGTSGGIGLA AGTIVITDKA VDSFFRPQFE QVVLGKVITR 180
  181 STELDVDIAQ ELLQYSSELT DMPTVFANTM CTHDFYEGQG RLDGALCSFS TEEKFEYLRK 240
  241 ASKAGVRNIE MESSVFAAMC HVCNLKAAVV CVTLLNRFEG DQISTPHDIL MEYQQRPQRL 300
  301 VAHLIKKRLG LIS

Type	Start	End	Confidence
Cytoplasmic	1	135	0.62
Transmembrane Helix	136	157	0.72
Non-Cytoplasmic	158	313	0.88