YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182891764, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLYHQTNK QIQEVQSQMG RLEKTDRQSV HLLENELQAR IDQIFNQLER LEILASKEPP  60
   61 NRRQNAKLRV DQLKYDVQHL QTALRNFQHR RYAHEAQERE REELLSRSFT TNDADTSIPI 120
  121 DETLQFNSSL QNAHRGMDDL LGSGSSILNG LRDQRSTLKG THKKMLDVAN MLGLSNTVMR 180
  181 LIEKRASQDK FIMMAGMLAT CVVMFLVVKY LS

Type	Start	End	Confidence
Cytoplasmic	1	189	0.83
Transmembrane Helix	190	211	0.88
Non-Cytoplasmic	212	212	0.85