YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38303795, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTKSKAAE NTGSDLSEQI KAVTKDSHVR AENTQLMLSY QKGQITQTQY KLLLCSLYEI  60
   61 YRALEEELDR NADHPAVQPI YFPQELARLE ALGQDLEHFF GPQWRKRITV PAATHRYAQR 120
  121 LREIGKSSPE LLVAHAYTRY LGDLSGGQVL GKITQKSLGL TGNKGILFFS FPGVTSANRF 180
  181 KQLYRSRMNS IEFTEQKRRE ALDEAVRAFE FNIDVFDDLQ KMLSITEEAS SDKGNEAASQ 240
  241 SLSKTFSSSP ALQFALGVGI TLATVGMGVY AF

Type	Start	End	Confidence
Non-Cytoplasmic	1	249	0.73
Transmembrane Helix	250	271	0.87
Cytoplasmic	272	272	0.66