YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	T23OB_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGCPFLGGT LQLLSSNPRQ AEEEDGSQGG VNKAAKGGII YGDYLQLDKV LNAQVLQSEQ  60
   61 KGNKIHDEHL FIVTHQAYEL WFKQILWELD SVRDLFIKKH VRDERNMLKV VSRIHRITMI 120
  121 FKLLVDQFAV LETMTALDFF DFREYLSPAS GFQSLQFRLL EQKIGVADHL RVPYNRRHYR 180
  181 DNFHGEESET LLSSEQEPTL LQLVEQWLER TPGLEKDGFN FWGKLQANIE EGLKREKHQV 240
  241 EKMEDTEVKQ ELLEDLNKQM ETFTALFDSK RHEHLLSKGE RRLSYKALQG ALMINFYREE 300
  301 PRFQVPFQLL TALMEIDTLM TKWRYNHVCM VHRMIGSKAG TGGSSGYHYL RSTVSDRYKV 360
  361 FVDLFNLATF LVPRSWVPKL NPNIHKFPYT AECYDSSYNS CSSEDSD

Type	Start	End	Confidence
Signal Peptide	1	21	0.80
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	407	0.99