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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PGES2_DANRE
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAACTRTLG KVGRLVLDTP TCRFTNTAAF VPRTSMRCQG RAYGTGSSGF KSRLLLAAPV  60
   61 RGSGRVLGCA FLLGGGFGLY QTIKLTLQHH LAEKESDASD LDTDLKLTLY QYKTCPFCSK 120
  121 VRAFLDYHRL PYEIVEVNPV MRQEIKWSTY RKVPILMVNG TVQLNDSSVI ISALKTYISS 180
  181 KDKKISEILA CYPEMKSKND RGKDVIEFGN KYWVMVHDAD ADQLYPGKDS RKEEIKWRTW 240
  241 ADDWLVHLIS PNVYRTPTEA LASFDYIVRE GKFGSFEGFF AKYFGAAAMW IISKRLKYKH 300
  301 NLQADVRQDL YKAVNDWVAA IGKNKQFMGG DEPNLADLAV FGVLRVMEGL QSFDDMMEHT 360
  361 KVKKWYSRMQ KATQHVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle