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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHID1_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRADWTFLLV CLLLPVVRST LSKTDAKKAS KVQEAESSVA ERPAQDRGLV VTDPQWRDIV  60
   61 REEKRFCHQC INTRQFKGAV LGYITPWNSH GYDIAKLFGP KLTSVSPVWL QLRRRGPESF 120
  121 HITGLHDHDP GWVKAVRKAN KKNKILPRLL FDGWSYQDYV SVLDSEDEME ELGREALEVA 180
  181 KAEGFDGYTL ELWSQLGGNK RKELVHLVTH LCETLNAGKL TCVLVIPPSV APGTGQPGMF 240
  241 GRDDFEKLAP VVDAFSLMTY DYSGPGRPGP SAPLPWVREC VLQLAPENQW RHKILLGVNM 300
  301 YGLDFSSHGG AEPLLGARCI ELLKEVKPKL QWDENTGEHF FNYKRNNGVK HVVYYPTLKF 360
  361 LQLRISLAAE LGTGISMWEL GQGLDYFYDL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle