YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41055813, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGCRPCVF IWAVLLLLLP SVIMAYRPVI IVHGLLDGPA QFRVLTNFIN ESHPGTSVTT  60
   61 IALYDYTASV KPMWQQVEGF KEAISPIMES AVDGVHLICF SQGGLICRGV LATVPHHNVR 120
  121 SLIFLSSPLA GQYGDSSYFK HFFPIFIKSR LYHFCYTSFG QKISICNYWN DPHQRERYLK 180
  181 NSVFLAPLNG EVNHDNSTEW RNHFMHIEKL VLIGGPDDGV ITPWQSSMFG FYDSDETVID 240
  241 MEYQDYYASD AFGLKTLNSE GAVEKCVVSG VQHTHWHSDY SVYQKCIEKW LT

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	292	0.99