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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30313702, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERYQLSVLC WWTFLISTVV DWRGVDGNNP FYRPYRIPQL CKFCDVLESN CNGKDTCESN  60
   61 CSITSICESP DEICVAIWRQ SDDNNTIETL CHNPTVPLYG IMVENNNNTK CEMKKRISNS 120
  121 GPFHICSCNE VECNDMLLFK LPTNNQVVLV ILVSLLPLLV LAVLVIASFY WYRMYRRRKL 180
  181 DEWETKKPSK HKGPKGPLDC SDACAIMMDD DRSDSSSTHA NNINHNMDPL PIELDLQVGK 240
  241 GRFAEVYKAK LRQSPSEQFE TVAVKIFPYE EYASWKNEKD IFQDIDLKHE NILHFLTAEE 300
  301 RKVEKQYWLI TAFHPRGNLQ EYLMRHLLSW EDLRLLGSSL ASGVAHLHSD HTPCGRPKVP 360
  361 IVHRDLKSSN ILVKNDLTCC LCDFGLGLRL DDSLSVDELA NSGQVGTARY MAPEVLESRI 420
  421 NLENIESFKQ TDVYSMALVL WEITSRCNAI GEVKDYEPPF GSKVREHPCV ESMKDNVLRD 480
  481 RGRPEIPSSW MKHQGVAAVC ATINECWDHD PEARLTAQCV AERFNEMDDD LDKLSTCSSS 540
  541 EEKIPEDCAV SVSDDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle