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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32528169, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESSCVSGA PQRLVPLALR GEWMALEQKI KTLERGDPDI LQCDEESGMS LLMLAVRESR  60
   61 LSVLDRLLEL GANPSDKTKD GRSALHIAAA HSKDEIVKLL VRKTDPNSPA GPNDQLPLHY 120
  121 AASRSTGGLA VVQTLLKFSS KDARLTPDKN GCLPLLLAAE AGNVGIVREL LSSQSEPQIR 180
  181 AAKTANGDTA LHICCRRRDV EMAKILVEFG ANPDSQNDEG QTPLHIAAHE GDENMLKFLY 240
  241 LCKANANISD KMDRSPLHIA AERGHTNVVE ILTEKFRSCV LARTKDGNTL LHIASQCGHP 300
  301 TTALSFLRKG VPLHMPNKSG AVCLHAAAKR GHTAVVKALL QKGAHVDAAA RDGQTALHIA 360
  361 VENCRPQVVQ MLLGFGAHVQ LRGGKAQETP LHISARVKEG ERAAEMLLKS GAEVNAEQEN 420
  421 GETALHVAAR HGSLQMIRAL IQEGGDPRWR SRVGESPLHV AVRHCHAHVV QEILTFLTNE 480
  481 KSRRDAELCV CEGNQDGETA LHLAAELRTD ALHQPEEDIT IIQILMEHQA DITAVTRQTG 540
  541 ETPLHYSARV GNTAVLQEML RNVPTNQIQT AINKHSKNGW SPLLLAADQG HTEVVKILLQ 600
  601 NNARVDVFDE EGKAAIHLAA QRGHQDIVDV LLSQKAFVNA KTKQGLTPLH LSAQNGSARL 660
  661 VRLLVENHQA SVDALSLRKQ TPLHLAAMSG QLDVCSSLLN LRADITATDS RGQTPLHLAA 720
  721 ESDHSEVVKL FLRLRPELST LANEDGSTCT HIAAAKGSVS VIRELLMFNQ GGVGTLNHKA 780
  781 HGLCPLHLAA AGGHAEVVKV LLEAGASVTE EDAEGMTAVH LAAKHGHTHI LEVLRGSVPL 840
  841 KIQSSKTGFT ALHVAASFGQ MNFVREILTK VPATIRSEFP TISGKDDIKR QQPLAESGFT 900
  901 PLHLASQSGH ESVVRLLLNC PGVQADAETN IQGSSPLHLA AQSGHTAVVG LLLSRSSSLL 960
  961 HQADRRGRSA LHLAAAHGHV DMVRVLLGQG AEINHTDMSG WTALHYAAEA GCLEVLLFLV1020
 1021 ESGASACAEC HGGRTPLQYA AQQNHESAVI FLLRREKNTL RLLDDKKFIF NLMVCGRMND1080
 1081 NLSLEELVLH TSAPLDTAVR LSRALTLCAL REKERSVDLQ AAAHHCELMA SDLLSLSASA1140
 1141 GGQGAGAGPI LRALDHRGLS VLDCLIEGRQ KGVVSQPAVQ TYLTEVWCGG LQWDSWKILL1200
 1201 LFCCLLLCPP LWLLLALPLT HSFNTIPIVK FMSHLVSHIF LLTLFILTIV YPPVSPLSQA1260
 1261 RLMPSWSECL LLIWLCGMLV SELTFPGERT GLAWIRLLLL GFSAAALLCH LLAVFTQWWP1320
 1321 PTHLHCLFAR NVLLAVAMTL GFIQLLEFLT FHHLFGPWAI IIRDLIKDLC RFAVILMLFH1380
 1381 TAFTLSLTAL CQPLYPQEQH NTTTEVTVPG PLNMSVLLFF ALFGLTEPDK IPDVDRSPPA1440
 1441 TAVLAKMVFG VYLVVTFIVL INLLIAMMSD TYQRIQAQSD TEWKFGRAVL IRDMSRKSGI1500
 1501 PSPFNLFTNL FYSVKVVCKR AGKMCSSESR DVMNEDEDAE GLSESRSLDL LSQASVSGIR1560
 1561 GNKRTQILPE GGQISLAHSG GHVRVENVAD WPSVVQQFLS QRRQRDRSTA ERDE

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