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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27127277, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLTLFALA ITLIATVFAA KSPYQAVLQH SRIRGRTQGP NVCAMQKIPG SDKKYFTNCK  60
   61 QWYRRKICGK PTVISYECCP GYEKVIGEKG CPAALPLVNI YKTLSVVEAT TTKMYSERAK 120
  121 LQEEIEGPGS FTFFAPSNEA WAPLPTEILD ALVSNVNIEL LNALHYHMIN KRLTSEDLKH 180
  181 GSSFSSMHQD FDVHIHHYSN GIVTVNCARL VKTDQHATNG IVHVVDRVIT AITNDVNSII 240
  241 DTDDDLDTLR TAVAAAGLTT LLENQGSYTI FAPTNEAFEK IPPDTLTRIL GDPVALKDLL 300
  301 NFHILKNLHC SESIVAGTPL ETLQGTMLEV GCDGEDLTIN GKAVVTQKDK LGTNGVVHYI 360
  361 NELLIPDSAK TLLELAEGSV VTTAAKLFKD AGLNDHLVGS ESVTLLAPLN EAFKDKSFAM 420
  421 TPDMKKLLRN HILKEKFSSK SLYHGQELET LGGLKLRVFV FRNNLCIENA CIAAHDKNGR 480
  481 YANMFLVDSI LTPPQGTVMD VLKADNRFST LVGAIQKAGL TELLNKKGTY TFFAPTNAAF 540
  541 SALPSADLNK LMRDPKELAN ILKYHIGDEF LVSGAVTSHT RLKPLAGDKL ELGTRNSTIY 600
  601 VNRVPVVESD LMATNGVVHA VNVIIKPLPP KIVSDQAEGS TIRRTSAVRA GSQVSKNDDL 660
  661 FQKVLRSHSS RTLSRVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle