YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33468617, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLPSRFIY VCLHLLVLYF QLQESHQSSA DFRFYIENHT RDDVSRKQVR IYQLYSRTTG  60
   61 KHVQILGKKI NANGDDGGKY ALLVVETETF GSHVRIKGQE SGYYICMNKN GKIIGKPNGN 120
  121 SQECVFVEEY LENNYTALMS AKYRGWYLGF NRKGRPKKGS KTTQTQQEVH FMKRQPKGKE 180
  181 DLPEKFLFTT VTKRTRRARR LKPNPNTN

Type	Start	End	Confidence
Signal Peptide	1	30	0.84
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	208	0.99