YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24571204, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCKWKVTKGA SAWFRLSCLS LPLLLLFLCS ALPVACHDTH RAIRAPRGTN SSSSAVVGRH  60
   61 VRSYNHLTGD VRRRKLFSYQ KFFLRIDKNG KVNGTKSKDD PYSTLEIKSV DVGIVAIKGI 120
  121 QSNYYLAINK KGVVYGARDF GIDCKLIERI EENRYNTYAS AEWMNKKKHM FVGLSANGRP 180
  181 MRAKKTRRKN TATHFLPIPI V

Type	Start	End	Confidence
Signal Peptide	1	36	0.97
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	201	0.99