YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21105405, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEYLASIFG TEKDKVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN IYRNPQNTAQ  60
   61 SADGLNAVSD VEMQEHYDEF FEEVFTEMEE KYGEVEEMNV CDNLGDHLVG NVYVKFRREE 120
  121 DAEKAVINLN NRWFNGQPIH AELSPVTDFR EACCRQYEMG ECTRGGFCNF MHLKPISREL 180
  181 RRELYGRRRK RHRSRSRSRE RRSRSRGRNK GVGGAAAGGG GGGGGGGGGG GGRDRERRRS 240
  241 RDRERSGRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	210	0.79
Transmembrane Helix	211	232	0.83
Cytoplasmic	233	249	0.66