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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20501857, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLTGKDDY KVAATSEDGV KTPKKGKKNK KDMDELKKEV EMDDHKLTME ELSRKYGTDL  60
   61 TKGLPVSRAM EVLMRDGPNA LTPPVITPEW VRFCRQLFGG FQTLLWIGAF LCYFAFSIQA 120
  121 ATEEPVNDNL YLGIVLTFVV TVNGCFSYSQ EAKSCRIMDS FKNLVPQKAL VVRDGEKKII 180
  181 DAEEVVVGDL VEVKGGDKIP ADIRIVSSHG CKVDNSSLTG ESEPQIRTPD MSSENPLETR 240
  241 NIAFFSTNCI DGAARGIVVN TGDRTVMGRI ASLASNLEGG QTPLGREIEH FIHIITGVAV 300
  301 FLGTTFLIIS VMLGFTWLEG IIFLIGLIVA NVPEGLPCTV TVALTLTAKH MAKKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHIA DTTENQTGAS FDRSSATWSA 420
  421 LARVAGLCNR AVFQSNQSHL PVLRRETAGD ASESALLKCI ELCCGSVTGM RENYPKVAEI 480
  481 PFNSISKYQL SIHENPNSSE PKHLLVMKGA PERILDRCST ILIEGKEHPL DDEMKEDFQN 540
  541 AYVQLGGLGE RVLGFCHFCL PDDQFPEGFA FDTEEMNFPT ENLCFVGLMS MIDPPRAAVP 600
  601 DAVAKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VDDIAARLKI HIDEVNPRDA 660
  661 KACVIHGGEL KNMTDEQLDD VLQHHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GVAMGIAGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSICYTL 780
  781 STKIPEMSPF LMFVLAGIPL PLGTVTILCI DLGTDMVPAI SFAYENAESD IMKRQPRNAA 840
  841 TDRLVNERLV SVSYGQIGVM NAFGGFFTYF VILAENGFLP WDLVGLRIGW NDRYFSEVED 900
  901 SYGQQWTYEQ RKVLEYTCHT AYFTSIVIMQ WTTLLVCKSR RLSLAKQGMK NRVLTFSLFE 960
  961 ETAIAAFLSY CPGMDIAVRM YPLKPMWWFC AFPYMILIFI YDEVRKHFIR QNPGGWVERE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle