YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SELPB_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQALWPLLLS ALPALLGASS LFVEKESNGS RICKPAPQWE IDGKTPMKEL LGNVVVVALL  60
   61 KASUHFCLTQ AARLGDLRDK LANGGLTNIS FMVVNEQDSQ SRAMYWELKR RTAQDIPVYQ 120
  121 QSPLQNDVWE ILEGDKDDFL VYDRCGYLTF HIVLPFSFLH YPYIEAAIRA TYHKNMCNCS 180
  181 LNANFSISES SDSTKNDPAG ENNQRPNSTE PVTAAHHHHH QQHEPHHHHH NPYPNSHKKS 240
  241 GDSDVTGKPK EPPHHSHQEH VHNHR

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	265	0.99