YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WN10B_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELPHRQCLG RVLIVTAALL SPAFTVLGND ILGLKVAGEP VLTPNAVCLR LAGLTKKQMR  60
   61 LCVRSPDVTA SALQGIQVAI HECQHQLRDQ RWNCSSLENH GKLPHQSAIL NRGFRESAFS 120
  121 LSLLAAGVVH SVASACSLGK LRGCGCEAKR RLDDDKIRLK LTQLQLQTFQ RSGVSLAGAG 180
  181 ENTPELSSLH GSLPANLHSS HPMSLLKPLP DEVTMLQDTW EWGGCSHDIR FGVRFSRDWL 240
  241 DSRGSPRDIH ARTRIHNNRV GRQVVTDNMR RKCKCHGTSG SCQFKTCWYV SPEFRLVGSL 300
  301 LREKFLTAIF INSQNKNNGV FNSRTGGSTG SDPLRGQRRR SISRELVYFE KSPDFCDREP 360
  361 AVDSLGTQGR ICNKSSPGMD GCGSLCCGRG HNILKQARSE RCHCRFHWCC YVLCEECKVT 420
  421 EWVNVCK

Type	Start	End	Confidence
Signal Peptide	1	28	0.91
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	427	0.98