YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37543529, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLWMILTL GLTAFLSGER ISVSAAKSPS TTDDLYLEEA GSGGYPEDDD DFSSGSGSGA  60
   61 GEVIEDPVTV NTLFFVPKAE PTQDSTKDFT PKVETVTSQD APKDSKKRRI EVAVPVTEDS 120
  121 RRNPVTSTTS IPRPPMDPQD VQSENLFQRT EVLAAVIAGG VIGFLFAIFL ILLLVYRMRK 180
  181 KDEGSYDLGE RKPSGAAYQK APTKEFYA

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	151	0.99
Transmembrane Helix	152	175	0.94
Cytoplasmic	176	208	0.99