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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|166795887, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVVLALTV ALVACQQFIL VPEFAHDKTY VYKYEALLLG GLPQEGLARA GIKVSSKVLI  60
   61 SATTENTYLM KLMDPLLYEY AGTWPKDPFV PATKLTSALA AQLQIPIKFE YANGVVGKVF 120
  121 APAGVSPTVM NLHRGILNIL QLNLKKTQNI YEMQEAGAQG VCRTHYVINE DPKANHIIVT 180
  181 KSKDLSHCQE RIMKDVGFAY TEKCAECTER VKSLIETATL YYIMKPADHG ALIAEATVEE 240
  241 VDQFSPFHEI HGCCMMEAKQ TLAFVEIEKT PVVPIKADYM PRGSLQYEFA TEILQTPIQL 300
  301 MKISDAPAQI VEVLKHLVSN NKDMVHDDAP FKFVQLVQLL RVASLEKIEA IWSQFKDKPV 360
  361 YRRWLLDALP AVGTPVIIKF IKEKFLAGEF TTPEFIQTLV IALQMVTADP ETIKMTASLA 420
  421 THEKFATIPA LREVVMLGYG SLIAKYCVAV PTCPAELLRP IHEIATEAIS KNDIPEITLA 480
  481 LKVMGNAGHP SSLKPIMKLL PGLRTAANAL PIRVQVDAIL ALRNIAKKEP KLVQPVALQL 540
  541 VLDRALHPEV RMVACIVLFE TEPSVALISS LAGALRTEPN MHVASFAYSH IKSLTRITAP 600
  601 DMAYVAGAAN VAIKLMNCKL DRLNYRYSRA FKMDYYYTPL MIGAAGSAYM INDAATILPR 660
  661 AVVAKARTYL AGAAADVVEF GVRTGGIHEA LLKSPAADES VDRITKIKRT LRALTNWKAL 720
  721 PTDKPLASAY VKVFGQEVAY VNFDKTIIEE AIPMVTGPKP RALLKEALKA LQEGVAFQYA 780
  781 KPLLAAEVRR ILPTAVGVPM EFSWYTAAVA AASVNVQATV TPALPEKLES MTYEQLKKTD 840
  841 VQFQAEARPS VALQTFAVMG VNTAFIQAAV MARGKIRTIA PGKVAARADI LKGNYKVEAL 900
  901 PVELPEHIAS ASFETYAVVR NIEDHSAERS IPLVPELSLQ NSQASYAGDL SSEMSSVASV 960
  961 RAPAPFDRTL CYAVPYIEIK GCVEVHSHNA AFIRNSTLFY IIGHHSVRAA VARAEGPAVE1020
 1021 RLEFEVQVGP RAAERLVKQI NIIDDDTPEG QAFLLKLREI LDTEAKNAPV SSESSSSRNS1080
 1081 RSSSSRSTST SASSSLRSSS SSSQSSSSSM SSSRMSKTAT IIEPFRKFHK DRYLAHHSAT1140
 1141 KDTSSGSAAA SFEQMQKQNR FLGNDIPPVF AIIARAVRAD QKLLGYQLAA YFDKPTARVQ1200
 1201 LIVSSIAEND NMKICADGAL LSKHKVTGKF SWGAECKQYA VFAKAEAGVL GEFPAARLEV1260
 1261 EWERLPIIVT TYAKKLGKHI LTAAYDTGFR FERATNSEKE IELTAALPSQ RSLNIIARIP1320
 1321 EITMSKRDIY LPVAVPINPD GTFSIETYED FLAWIQKYIK EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle