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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50057055, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPWTGSWRW IALVLLAWGT LLFYIGGHLV KDSEHAPRSS RELAKILTKL ERLKQQNEDL  60
   61 RRMAQSLRIP EGQSDGPISS GRLRSLEEQL SRAKQKIQSF QRLSGEGPGK DHEELRRKVE 120
  121 NGVRELWYFV RSEVKKLPLM ETGAMHKHVD TLMQDLGHQQ RSVMTDLYHL SQADGAGDWR 180
  181 EKEANELSDL VQNRIMYLQN PQDCSKARKL VCNINKGCGY GCQLHHVVYC FMIAYGTQRT 240
  241 LILESQNWRY ATGGWETVFK PVSDTCTDRT GASTGHWSGE AHDRDVQVVE LPIVDSLHPR 300
  301 PPYLPLAVPE DLAPRLQRLH GDPSVWWVSQ FVKFLVRPQA WLEKEIQETC LKLGFKHPII 360
  361 GVHVRRTDKV GTEAAFHPIE EYMVHVEDHY QSLAQRMHVD KKRVYLATDD PSLLQEAKTK 420
  421 YPDYEFISDN SISWSAGLHN RYTENSLRGV ILDIHFLSRT NYLVCTFSSQ VCRVAYEIMQ 480
  481 TLHPDASSYF YSLDDIYYFG GQNAHNQIAI YPHQPRNSDD IPLEPGDVIG VAGNHWDGYS 540
  541 KGINRKTGRT GLYPSYKVKE KIETVKYPTY PEADKLLKKP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle