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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34812015, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKKLEFSLL FLSILIFTNH IRGFNLDLNQ YTVFSGPEDS YFGFSVDFYQ SSSKSVSVVV  60
   61 GAPRANTNQS GVSHGGSVFM CPWATRGQSC QTLNFDQKGD ENITFGNMLL MAHKSNQWLG 120
  121 ASVRTYNNYI LACAPLFHWN VLVDQEEAMN TPVGNCQLLN MKTGELANYA PCREEYVYAI 180
  181 YTRGYPDRRY CEAGFTTDIT KNGRVVLGAP GGYYFQGQII TASLVNIMSS GSSFTPKHSM 240
  241 NGETKTPQRR DYYDLYLGYS VAAGKFNNDN IPDYVVGVPN DLHTAGSVKI INGATVPLQI 300
  301 MKAISGTQIA SYFGHSVAVT DINRDGWDDI LIGAPLFMEQ LSTQKFREVG QVYVYLQRND 360
  361 FSFASRPNQI LAGTYAYGRF GSAIAPLGDL DHDGFNDVAV GAPGSVDGGK VFIYLGKSGG 420
  421 LSTQYVQVIE SPFRSLIDPP MFGFSIRGGT DIDDNGYPDL IIGAWGASKV VTYRAQAVVR 480
  481 TQARLSFFPD LLNPEDKFCQ LQQSGTYITC FTIMACIRVS GHRIPQQIVF NTELQLDRMK 540
  541 QSMARRTLLL DSNQPYTNFQ ISVDRNSRDV CRNFTAYLLP EFKDKLSPIF ISVNYSLADS 600
  601 QNAVLHGQSV AVGQTRIILN CGPDNVCIPD LQLKAVTSTE PILIGDENPA LLIIEAENQG 660
  661 EGAYETELYI SPPANTHYQG VLSNHEDFSA LVCGQKKENG SVIVVCDLGN PLEAGQQLKA 720
  721 GLYFSMGDLE QVENHITFQM QIRSKNSQNS DSNLVQLQVN VTAVASLEMR GVSSPVDCVL 780
  781 PISKWESKDY PEDLDEVGPL IEHVYELRNR GPSPVNVKLT LEFPVSQNES YLLYVFANAS 840
  841 EELISCQTDY ANIDPRRLVK QESTNITVAE VHHFNKRDLS QKTENEQQWQ HTVHVNCSSS 900
  901 EQCVVFDCVA AGLQRDERAI VRVMSRLWVQ TFLKRPYVNY VLHSTAHYEV MNVPSKIQPD 960
  961 VLPTGKAETH TKIIWRSPDG QEEVPLWWIV VSIVAGLLLL AALSTIFWKM GFFKRNRPPS1020
 1021 DNDDDDDDDV TQQLNGD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle