YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47086003, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.63
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSVRIITP LFVLFAGVQA RFNTSNCKLV SDSESQRKAL RLLEPLTNQN FTTEGQEKEK  60
   61 YSYIFQVCGD AGGVKNAGLI QQEKGGKTIR IGDYSKTVAT AGSDWVLLIY EGGEKYDSHC 120
  121 SSEERKAMIM ISCSSSSKSA FSVVMEENQK QKNCYYLFEL DTTAVCPAVS SKLSAGSIVL 180
  181 IVVISSLTVY IIGGFLYQRL VVGAKGVEQF PNFAFWSEIG NLSADGCDFV CRSRGNREEP 240
  241 PTYRGVGTEP LGEEPEERDD HLLPM

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	177	0.98
Transmembrane Helix	178	197	0.61
Cytoplasmic	198	265	0.63