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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37722565, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGVLAFLV LGTCSLRAWC LPLKSVFVTF PGDVIKNMTN TQLADEYLKR YGYVDVLQRS  60
   61 GLQAVISNAK ALKKLQRQLG LEETGLLDQP TVDAMKQPRC GVPDIRNYKT FDGDLKWDHT 120
  121 DVTYRILNYS PDMEASLIDD AFARAFKVWS DVTPLTFTRL FDGIADIMIS FGKLDHGDPY 180
  181 PFDGKDGLLA HAYPPGEGTQ GDAHFDDDEY WTLGSGPAIQ TRYGNAEGAM CHFPFLFEGT 240
  241 SYSTCTTEGR TDGLPWCSTT ADYDKDKKFG FCPSELLFTF DGNSNEAPCV FPFVFDGKKY 300
  301 DSCTTEGRND GYRWCSTTAN FDTDKKYGFC PNRDTAVIGG NSEGEPCHFP FTFLGNTYSS 360
  361 CTSEGRNDGK LWCGTTSNYD TDKKWGFCPD RGYSLFLVAA HEFGHALGLD HSNIKDALMY 420
  421 PMYKYVEGFP LHRDDIDGIQ YLYGPRTGPE PTAPQPRTTT SSPVVPTKPS PSDKTTTAST 480
  481 TTQVVPSDDA CQIKEFDAIT EIQKELHFFK DGRYWKISGN GERKGPFMIS AKWPALPAVI 540
  541 NSAFEDHLTK KIYFFSERQF WVYSGNDVLG PRKIEKLGLP SDLDKVEGSM QRGKGKVLLF 600
  601 NGENFWRLDV KAQLIDRGYP RFTDAAFGGV PIDSHDVFLY KGFFYFCRES FYWRMNAKRQ 660
  661 VDRVGYVKYD LLKCSDIHSL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle